BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G06SP1|AL426735
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1071 1557 0.0
>3x_Contig1071
Length = 4881
Score = 1557 bits (783), Expect = 0.0
Identities = 787/791 (99%)
Strand = Plus / Plus
Query: 1 caaatcaacaattctacttgtaagacttgcatgaaactcatgtaacgtatgaggtccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3253 caaatcaacaattctacttgtaagacttgcatgaaactcatgtaacgtatgaggtccaga 3312
Query: 61 ataatatatatataavtbtvaagagaccaaacaccgttgtgtagtactgcagtttgcatc 120
||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3313 ataatatatatataaatttaaagagaccaaacaccgttgtgtagtactgcagtttgcatc 3372
Query: 121 gtccttattactgcaaaggaaaaaaaaaggtctggtaaatggccggctggcagcaatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3373 gtccttattactgcaaaggaaaaaaaaaggtctggtaaatggccggctggcagcaatata 3432
Query: 181 aaattactttttccgtatttactgggatgaaataccaggcttcttgtcatgaaatatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3433 aaattactttttccgtatttactgggatgaaataccaggcttcttgtcatgaaatatttg 3492
Query: 241 catttaatattagtactactggtagtactactggtagtactttcttcagataataattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3493 catttaatattagtactactggtagtactactggtagtactttcttcagataataattat 3552
Query: 301 ttaggtgtaatgaaagatgcgctgcagattctaacacaagtgctgcctcaatttccaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3553 ttaggtgtaatgaaagatgcgctgcagattctaacacaagtgctgcctcaatttccaatt 3612
Query: 361 ccttggtgtgcggttttctgtttcgcgattatgccagatatggtagagaagcgaatctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3613 ccttggtgtgcggttttctgtttcgcgattatgccagatatggtagagaagcgaatctat 3672
Query: 421 gcyacaatcagggcgtaggaaatctggaaaaaaaaggttcagagccttagcaacaggaac 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3673 gctacaatcagggcgtaggaaatctggaaaaaaaaggttcagagccttagcaacaggaac 3732
Query: 481 gtagaaacggcatataacagagtgtgagtgaatgtgcctgtaggtgtcctctcatgtgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3733 gtagaaacggcatataacagagtgtgagtgaatgtgcctgtaggtgtcctctcatgtgac 3792
Query: 541 tgacagataaacaggaagccctttgtagtgggggttattggatctgcgtaggtgtacact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3793 tgacagataaacaggaagccctttgtagtgggggttattggatctgcgtaggtgtacact 3852
Query: 601 gtgccaatgttcttttctttggcgatttgaatagcgataattccggaatagttacactat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3853 gtgccaatgttcttttctttggcgatttgaatagcgataattccggaatagttacactat 3912
Query: 661 atatggtatcaatactgtatgagtcaatacatttgtcgccttattctgtataccagagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3913 atatggtatcaatactgtatgagtcaatacatttgtcgccttattctgtataccagagat 3972
Query: 721 tactaatgtatatgaatagtcgaagatcaatgtgcagcagcacattgatcttcttgtctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3973 tactaatgtatatgaatagtcgaagatcaatgtgcagcagcacattgatcttcttgtctc 4032
Query: 781 tccctttctgt 791
|||||||||||
Sbjct: 4033 tccctttctgt 4043
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8388
Number of Sequences: 1807
Number of extensions: 8388
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)